BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E11LP1|AL429587
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1565 1715 0.0
>3x_Contig1565
Length = 10922
Score = 1715 bits (865), Expect = 0.0
Identities = 865/865 (100%)
Strand = Plus / Plus
Query: 1 atcgttaaccgaaagtatgagatgtagagtatacgcttaacttagagtttatacaggtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5288 atcgttaaccgaaagtatgagatgtagagtatacgcttaacttagagtttatacaggtcg 5347
Query: 61 tacctgcttatactctgaggacagggtcggttttcaacagatatgtcggcttctgggtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5348 tacctgcttatactctgaggacagggtcggttttcaacagatatgtcggcttctgggtcg 5407
Query: 121 cgaatcagtgagcggttttgacttttttattttcttttttcactttaggaattaatttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5408 cgaatcagtgagcggttttgacttttttattttcttttttcactttaggaattaatttcc 5467
Query: 181 ggtaatggattatatacaggcgttttaaggttcctcgagaacctgctcaaattgaggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5468 ggtaatggattatatacaggcgttttaaggttcctcgagaacctgctcaaattgaggagg 5527
Query: 241 aggagggaaaaagtcactgatgcgagtgatgcatcagcacatgtgaatagaaagccaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5528 aggagggaaaaagtcactgatgcgagtgatgcatcagcacatgtgaatagaaagccaatt 5587
Query: 301 tgagccaaagaactactgaagaacgttcaattatttccttccttagatcgtacgaaatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5588 tgagccaaagaactactgaagaacgttcaattatttccttccttagatcgtacgaaatag 5647
Query: 361 gaattaatggaagcttacttattttgcttgcctttttcgagctactgtttcctaaatgcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5648 gaattaatggaagcttacttattttgcttgcctttttcgagctactgtttcctaaatgcg 5707
Query: 421 cattgtatatacatcagagatgaccgccttttttctttttgcaatacaccgggaaaaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5708 cattgtatatacatcagagatgaccgccttttttctttttgcaatacaccgggaaaaagc 5767
Query: 481 ctcagtcgacactgaaatcgtacagcatacgtggtccaaagggtgatactcctttaggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5768 ctcagtcgacactgaaatcgtacagcatacgtggtccaaagggtgatactcctttaggct 5827
Query: 541 ttgtcttttaggtccgctgattactatcattcgaggaaaatagtatatacgttcccggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5828 ttgtcttttaggtccgctgattactatcattcgaggaaaatagtatatacgttcccggaa 5887
Query: 601 tgattttctcagccggcattccgataaaagtcagaatagataggagggaggagaagcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5888 tgattttctcagccggcattccgataaaagtcagaatagataggagggaggagaagcagc 5947
Query: 661 tagagatagaagtaaatgtaggggaaggaagaaacgagttagtgcaaaatcaaagcgctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5948 tagagatagaagtaaatgtaggggaaggaagaaacgagttagtgcaaaatcaaagcgctg 6007
Query: 721 caaactctcaacgcgccacttctgctttaagaagaagcagaagaaagtatacgaaaggcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6008 caaactctcaacgcgccacttctgctttaagaagaagcagaagaaagtatacgaaaggcg 6067
Query: 781 gaaaatcagctcgtttccaggcttcctgtaagcttcattgataagcttctgtccattaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6068 gaaaatcagctcgtttccaggcttcctgtaagcttcattgataagcttctgtccattaaa 6127
Query: 841 tctactggaataaaacgctcagttt 865
|||||||||||||||||||||||||
Sbjct: 6128 tctactggaataaaacgctcagttt 6152
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6446
Number of Sequences: 1807
Number of extensions: 6446
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)